Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803465.1_cds_XP_016484442.1_7531
CDS Infomation

[gene=LOC107804984] [db_xref=GeneID:107804984] [protein=glutamate decarboxylase-like] [protein_id=XP_016484442.1] [location=join(37104..37189,37599..37803,38982..39182,40452..40666,41615..41868,42220..42272,42371..42847)] [gbkey=CDS]
Sequence

ATGGTTCTATCCAAGGCCGCCTCGGAGAACGATGTCTCCGTTCATTCCACCTTCGCTTCT
CGCTATGTCCGAGTTTCTCTTCCACGGTTTCAGATGCCAGAGAATTCAATACCAAAGGAA
GCAGCATATCAAATAATAAACGATGAGTTGATGTTGGATGGAAACCCAAGGCTGAATTTG
GCGTCGTTTGTGACGACGTGGATGGAACCAGAGTGTGATAAGCTAATCATGGCTGCCATT
AACAAAAACTATGTTGACATGGATGAATATCCTGTCACCACTGAGCTTCAGAATCGATGT
GTAAACATGATAGCACATTTATTTAATGCACCATTGGGAGAGGAAGAGACTGCAGTTGGA
GTTGGAACAGTTGGATCCTCAGAAGCCATAATGCTTGCTGGATTAGCATTTAAGAGAAAA
TGGCAAAACAAAATGAAAGCCCAAGGAAAACCCTATGATAAGCCCAATATTGTTACTGGG
GCCAATGTCCAGGTATGTTGGGAGAAATTTGCAAGGTATTTCGAAGTAGAGCTAAAGGAA
GTAAAGTTAGAGGATGGGTACTACGTTATGGACCCTGAGAAAGCTGTAGAAATGGTGGAT
GAGAACACTATTTGTGTAGCTGCTATCTTGGGTTCCACCCTTAATGGAGAATTTGAAGAT
GTTAAACGTTTGAATGATCTCTTAGTCGAGAAGAACAAAGAAACTGGGTGGGACACTCCA
ATTCATGTGGATGCAGCAAGTGGTGGATTCATTGCCCCATTCCTATATCCAGAACTTGAA
TGGGATTTCAGATTACCATTAGTAAAAAGTATTAATGTAAGTGGTCACAAATATGGTCTT
GTTTATGCTGGTATTGGTTGGGTTATTTGGAGAAGCAAAGAAGATTTGCCTGAAGAGCTT
ATCTTCCATATTAATTATCTTGGTGCTGATCAACCAACCTTCACCCTTAACTTTTCTAAA
GGTTCTAGTCAAGTAATTGCTCAATATTATCAACTTATTCGCTTAGGCTATGAGGGATAT
AGGAATATTATGGAGAATTGTCAAGAAAATGCTAGGGTACTCAAAGAAGGACTTGAAAAG
ACAGGAAAATTCAACATAGTTTCCAAAGAAATTGGAGTTCCATTAGTTGCATTCTCTCTC
AAAGACAACAGTAGACACAACGAATTCGAGGTTTCGGACCATCTTAGGAGGTTCGGGTGG
ATTGTGCCAGCATACACAATGCCACCAAATGCTGAGCACGTGACCGTGCTCAGGGTTGTG
ATCCGAGAAGATTTCTCCCGGACACTAGCTGAGAGGCTCGTGGCGGACATTGAAAAAGTC
CTCCATGAGCTCGACTCGCTCCCGGCCAGAGTCTCAGCTAAGTTGGCTGCGGCCGAGGAG
AGTAGCAGTGGAGTGCATAAGAAATCGGCAATGGAAGTGCAATTGGAGATCACTAATGTA
TGGAAGAAGTTTGTTGCCGAAAAAAAGAAGACAAAAAATGTAATATGTTAA

Peptide Sequence

PEP ID

XP_016484442.1
PEP Infomation

PREDICTED: glutamate decarboxylase-like [Nicotiana tabacum]
Sequence

MVLSKAASENDVSVHSTFASRYVRVSLPRFQMPENSIPKEAAYQIINDELMLDGNPRLNL
ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEEETAVG
VGTVGSSEAIMLAGLAFKRKWQNKMKAQGKPYDKPNIVTGANVQVCWEKFARYFEVELKE
VKLEDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLVEKNKETGWDTP
IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEEL
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNIMENCQENARVLKEGLEK
TGKFNIVSKEIGVPLVAFSLKDNSRHNEFEVSDHLRRFGWIVPAYTMPPNAEHVTVLRVV
IREDFSRTLAERLVADIEKVLHELDSLPARVSAKLAAAEESSSGVHKKSAMEVQLEITNV
WKKFVAEKKKTKNVIC

Transcript Sequence

Gene sequence data has not been registered.